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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890937.1_cds_XP_016445643.1_40585
CDS Infomation

[gene=LOC107770825] [db_xref=GeneID:107770825] [protein=ABC transporter B family member 28-like isoform X2] [protein_id=XP_016445643.1] [location=join(43271..43367,43502..43689,44216..44239,45124..45225,45671..45761,46193..46293,46427..46477,46579..46707,46918..46980,47062..47341,47709..47857,47961..48050,48246..48380,48469..48525,48639..48695,49094..49330)] [gbkey=CDS]
Sequence

ATGTCAATTAGCTTGGTAGTTCAAGATGCTACCAGTCTACCACCCATATTAGGCAAGATT
ATAGGTGAAATTTCAGCACAAGTGAAAAGACACTATGGAAGATTTTTTGAAGTACTTATC
GGAACAAGACCAGAGCCTCTGTTGGAACTGCTCAGTAAAGTGGGACTTCTATATGCACTG
GAGCCAATTTTTACAATTATCTATGTGGTGAACATGAATTCCATTTGGGAGAAGGTTATG
TCCAGCTTAAGGGCTCAAATTTTTCAGAGAGTACTGATTCAAAAGGTTGAGTTTTTTGAC
CGTTACAAGGTTGGTGAGTTAACAGCTCTATTAACAACTGATCTTGGTTCACTCAAAAAT
ATTGTCAGTGAGAATACTTCACGGGATCGTGGTTTTAGGGCATTATCAGAGGTGGTTGGA
ACATTGTCCTTATTGTTTGCTCTATCTCCTCAGCTTGCTCCAATTTTGGGCGTACTCATG
CTCACCGTGTCTATTTTAGTCGCTGTGTACAAGAGGACAACTGTAAATGTCTTCAAGGCT
CATGGACTGGTCCAAGCATCAATAGCTGATTCTGTGGCCGAGTCATTTTCTGCCATTCGC
ACTGTGAGGTCATTTAGTGGGGAGAAGCGTCAGATGTCAGTGTTTGCTCGCCAGGTACTC
GAGTATGAGAGTAGTGGAATAAAGCTTGGAACGTTCAAATCCTTCAATGAGTCAGTAACT
AGGGTGGCAGTTTATATCTCCTTGATGGCTTTGTATTGCCTTGGTGGAAGCAAAGTAAAG
GCAGGTGAAATGTCAGTGGGAATTGTGGCTTCATTTATCGGATACACTTTTACACTAACT
TTCGCAGTTCAAGGCCTCGTAAATACCTTTGGAGATCTTCGTACAGCTTTTGCAGCAACT
GAGAGAATCAACTCTGTTTTGTCTGGAGCTGAAATTGATGAAGCGCTTGCATATTCTTTA
GAGAAAGACATGAAGCAAAAGAAGGTCCGTGATGAGACTTTAGAATTATACTTGGTGAAT
GGTTCTAATGAGAAGAAACAATCTACCAAAACAAGATACATGTCTTCCTTAAAATTGGGT
AGCAGTGTGCGAAGCCTTGCAGAGACAGGTGATATCTGTCTTGAAGATGTGTATTTCTCG
TATCCAGTGAGGCCTGATGTGGAAATCCTCTGTGGTCTTAATTTAATGCTAAAATGTGGA
ACTGTTACAGCTCTGGTGGGACCAAGTGGTGCAGGGAAAAGTACAGTAGTACAACTATTA
GCACGTTTCTATGAGCCAACTCGAGGCCGCATAACTGTTGCAGGAGAAGATTTGCGAACA
TTTGATAAGAGCGAATGGGCACGGGTTGTCTCTATAGTGAATCAAGAACCTGTTCTTTTC
TCTGTATCGGTTGGAGAAAATATCGCCTATGGTCTCCCTGATGAGTTTGTATCCAAGGAC
GATGTGATAAAGGCAGCCAGGGCTGCCAATGCTCACGAGTTCATAATTTCAATGCCACAG
GGTTATGACACATTGGTTGGTGAACGTGGTGGCTTGTTGAGTGGTGGACAGAGGCAGAGG
ATTGCTATTGCAAGGGCTCTACTGAAGAATGCCCCTATTTTGATTCTCGATGAGGCCACT
AGTGCTTTAGACACAGTAAGTGAGCGTCTAGTCCAAGAAGCACTGGACCATCTGATGAAG
GGACGAACAACTTTGGTAATTGCTCATAGATTGAGCACAGTTCAGAATGCAGATCAAATT
GCTCTTTGTTCTGATGGGAAGATTGCGGAGTTGGGAACACACTTTGAGTTGTTGGAGAGG
AAAGGCCAATATGCTTCTCTGGTTGACACTCAGAGGCTCGCATTTGAATAA

Peptide Sequence

PEP ID

XP_016445643.1
PEP Infomation

PREDICTED: ABC transporter B family member 28-like isoform X2 [Nicotiana tabacum]
Sequence

MSISLVVQDATSLPPILGKIIGEISAQVKRHYGRFFEVLIGTRPEPLLELLSKVGLLYAL
EPIFTIIYVVNMNSIWEKVMSSLRAQIFQRVLIQKVEFFDRYKVGELTALLTTDLGSLKN
IVSENTSRDRGFRALSEVVGTLSLLFALSPQLAPILGVLMLTVSILVAVYKRTTVNVFKA
HGLVQASIADSVAESFSAIRTVRSFSGEKRQMSVFARQVLEYESSGIKLGTFKSFNESVT
RVAVYISLMALYCLGGSKVKAGEMSVGIVASFIGYTFTLTFAVQGLVNTFGDLRTAFAAT
ERINSVLSGAEIDEALAYSLEKDMKQKKVRDETLELYLVNGSNEKKQSTKTRYMSSLKLG
SSVRSLAETGDICLEDVYFSYPVRPDVEILCGLNLMLKCGTVTALVGPSGAGKSTVVQLL
ARFYEPTRGRITVAGEDLRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEFVSKD
DVIKAARAANAHEFIISMPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEAT
SALDTVSERLVQEALDHLMKGRTTLVIAHRLSTVQNADQIALCSDGKIAELGTHFELLER
KGQYASLVDTQRLAFE

Transcript Sequence

Gene sequence data has not been registered.